Supplementary material to the publication in Clinical Epigenetics,

Association of expression of epigenetic molecular factors with DNA methylation and sensitivity to chemotherapeutic agents in cancer cell lines

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Table S5

Significant strong trans- and cis-correlations of GMD expression with methylation of target gene regions in the pancancer dataset satisfying pFDR < 0.05 and |ρ| > 0.5

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HEADER LEGEND:
- pFDR, FDR adjusted p-value
- |ρ|, the absolute value of the Spearman correlation coefficient
- Spearman ρ, Spearman correlation coefficient
- GMD, gene affecting DNA methylation or demethylation, expression of which was included in the correlation analysis
- Target gene, the gene for which methylation of a particular probe was analyzed in the correlation
- Target gene region, gene region whose methylation was analyzed in the correlation
- GMD chromosome, chromosome on which the GMD is located
- Target gene cytoband, chromosomal region where the target gene is located
- Sample size, number of cell lines with available data included in the correlation analysis

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Type of correlation	GMD	Target gene	Target gene region	Spearman ρ (|ρ | > 0.5)	pFDR	GMD chromosome	Target gene cytoband	Sample size
Type of correlation	GMD	Target gene	Target gene region	Spearman ρ (|ρ | > 0.5)	pFDR	GMD chromosome	Target gene cytoband	Sample size
Type of correlation	GMD	Target gene	Target gene region	Spearman ρ (|ρ | > 0.5)	pFDR	GMD chromosome	Target gene cytoband	Sample size